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Getting Started with Scaffold PTM

Downloading Scaffold PTM

Batch Mode


Note: Much of the installation and setup for Scaffold PTM is identical to Scaffold. For more information, see the Getting Started With Scaffold FAQs.


Loading and Organizing PTM Data

Loading Data into Scaffold PTM

Organizing Data in Scaffold PTM



Scaffold PTM Pages and Displays

Pages and Panes

Protein and Modification Details



Calculations in Scaffold PTM



Exporting and Sharing Results from Scaffold PTM

Exporting Results

Preparing and Publishing results